HL_1N34_035
3D structure
- PDB id
- 1N34 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Thermus thermophilus 30S ribosomal subunit in the presence of codon and crystallographically disordered near-cognate transfer rna anticodon stem-loop mismatched at the first codon position
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- UUAGUUGCCAGCGGUUCGGCCGGGCACUCUAA
- Length
- 32 nucleotides
- Bulged bases
- 1N34|1|A|U|1125, 1N34|1|A|C|1129, 1N34|1|A|C|1140
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1N34|1|A|U|1121
1N34|1|A|U|1122
1N34|1|A|A|1123
1N34|1|A|G|1124
1N34|1|A|U|1125
1N34|1|A|U|1126
1N34|1|A|G|1127
1N34|1|A|C|1128
1N34|1|A|C|1129
1N34|1|A|A|1130
1N34|1|A|G|1131
1N34|1|A|C|1132
1N34|1|A|G|1133
1N34|1|A|G|1134
1N34|1|A|U|1135
1N34|1|A|U|1136
1N34|1|A|C|1137
1N34|1|A|G|1138
1N34|1|A|G|1139
1N34|1|A|C|1140
1N34|1|A|C|1141
1N34|1|A|G|1142
1N34|1|A|G|1143
1N34|1|A|G|1144
1N34|1|A|C|1145
1N34|1|A|A|1146
1N34|1|A|C|1147
1N34|1|A|U|1148
1N34|1|A|C|1149
1N34|1|A|U|1150
1N34|1|A|A|1151
1N34|1|A|A|1152
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain I
- 30S RIBOSOMAL PROTEIN S9
- Chain J
- 30S RIBOSOMAL PROTEIN S10
Coloring options: