HL_1N34_039

3D structure

PDB id

1N34 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 30S ribosomal subunit in the presence of codon and crystallographically disordered near-cognate transfer rna anticodon stem-loop mismatched at the first codon position

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

CCGGCAACGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1N34|1|A|C|1263
1N34|1|A|C|1264
1N34|1|A|G|1265
1N34|1|A|G|1266
1N34|1|A|C|1267
1N34|1|A|A|1268
1N34|1|A|A|1269
1N34|1|A|C|1270
1N34|1|A|G|1271
1N34|1|A|G|1272

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain M

30S RIBOSOMAL PROTEIN S13

Chain S

30S RIBOSOMAL PROTEIN S19

Chain V

30S RIBOSOMAL PROTEIN THX