HL_1NJN_074

3D structure

PDB id

1NJN (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed with the antibiotic sparsomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

CUAGUACGAGAGGACCG

Length

17 nucleotides

Bulged bases

1NJN|1|0|G|2634

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1NJN|1|0|C|2631
1NJN|1|0|U|2632
1NJN|1|0|A|2633
1NJN|1|0|G|2634
1NJN|1|0|U|2635
1NJN|1|0|A|2636
1NJN|1|0|C|2637
1NJN|1|0|G|2638
1NJN|1|0|A|2639
1NJN|1|0|G|2640
1NJN|1|0|A|2641
1NJN|1|0|G|2642
1NJN|1|0|G|2643
1NJN|1|0|A|2644
1NJN|1|0|C|2645
1NJN|1|0|C|2646
1NJN|1|0|G|2647

Current chains

Chain 0

23S ribosomal RNA

Nearby chains