HL_1NJO_073

3D structure

PDB id

1NJO (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed with a short substrate analog ACCPuromycin (ACCP)

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

CUAGUACGAGAGGACCG

Length

17 nucleotides

Bulged bases

1NJO|1|0|G|2634

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1NJO|1|0|C|2631
1NJO|1|0|U|2632
1NJO|1|0|A|2633
1NJO|1|0|G|2634
1NJO|1|0|U|2635
1NJO|1|0|A|2636
1NJO|1|0|C|2637
1NJO|1|0|G|2638
1NJO|1|0|A|2639
1NJO|1|0|G|2640
1NJO|1|0|A|2641
1NJO|1|0|G|2642
1NJO|1|0|G|2643
1NJO|1|0|A|2644
1NJO|1|0|C|2645
1NJO|1|0|C|2646
1NJO|1|0|G|2647

Current chains

Chain 0

23S ribosomal RNA

Nearby chains