HL_1NJP_075

3D structure

PDB id

1NJP (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed with a tRNA acceptor stem mimic (ASM)

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CUAGUACGAGAGGACCG

Length

17 nucleotides

Bulged bases

1NJP|1|0|G|2634

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1NJP|1|0|C|2631
1NJP|1|0|U|2632
1NJP|1|0|A|2633
1NJP|1|0|G|2634
1NJP|1|0|U|2635
1NJP|1|0|A|2636
1NJP|1|0|C|2637
1NJP|1|0|G|2638
1NJP|1|0|A|2639
1NJP|1|0|G|2640
1NJP|1|0|A|2641
1NJP|1|0|G|2642
1NJP|1|0|G|2643
1NJP|1|0|A|2644
1NJP|1|0|C|2645
1NJP|1|0|C|2646
1NJP|1|0|G|2647

Current chains

Chain 0

23S ribosomal RNA

Nearby chains