HL_1O0B_002

3D structure

PDB id

1O0B (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF L-GLUTAMINE AND AMPCPP BOUND TO GLUTAMINE AMINOACYL TRNA SYNTHETASE

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

AUUCUGAUU

Length

9 nucleotides

Bulged bases

1O0B|1|B|C|934, 1O0B|1|B|G|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1O0B_002 not in the Motif Atlas

Geometric match to HL_1QTQ_002

Geometric discrepancy: 0.1331

The information below is about HL_1QTQ_002

Detailed Annotation

tRNA anticodon loop with synthetase

Broad Annotation

T-loop

Motif group

HL_63894.3

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

22

Unit IDs

1O0B|1|B|A|931
1O0B|1|B|U|932
1O0B|1|B|U|933
1O0B|1|B|C|934
1O0B|1|B|U|935
1O0B|1|B|G|936
1O0B|1|B|A|937
1O0B|1|B|U|938
1O0B|1|B|U|939

Current chains

Chain B

Glutaminyl tRNA

Nearby chains

Chain A

Glutaminyl-tRNA synthetase