HL_1O0B_003

3D structure

PDB id

1O0B (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF L-GLUTAMINE AND AMPCPP BOUND TO GLUTAMINE AMINOACYL TRNA SYNTHETASE

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GUUCGAAUC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1O0B_003 not in the Motif Atlas

Geometric match to HL_4YYE_003

Geometric discrepancy: 0.1267

The information below is about HL_4YYE_003

Detailed Annotation

T-loop with 2 stacked bulged bases

Broad Annotation

T-loop

Motif group

HL_33597.3

Basepair signature

cWW-tWH-F-F-F-F-F

Number of instances in this motif group

135

Unit IDs

1O0B|1|B|G|953
1O0B|1|B|U|954
1O0B|1|B|U|955
1O0B|1|B|C|956
1O0B|1|B|G|957
1O0B|1|B|A|958
1O0B|1|B|A|959
1O0B|1|B|U|960
1O0B|1|B|C|961

Current chains

Chain B

Glutaminyl tRNA

Nearby chains