HL_1OB2_003
3D structure
- PDB id
- 1OB2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli elongation factor EF-Tu complexed with the antibiotic kirromycin, a GTP analog, and Phe-tRNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.35 Å
Loop
- Sequence
- GU(PSU)CG(MAD)UCC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU, MAD
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1OB2_003 not in the Motif Atlas
- Homologous match to HL_6UFG_008
- Geometric discrepancy: 0.3081
- The information below is about HL_6UFG_008
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.3
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 135
Unit IDs
1OB2|1|B|G|53
1OB2|1|B|U|54
1OB2|1|B|PSU|55
1OB2|1|B|C|56
1OB2|1|B|G|57
1OB2|1|B|MAD|58
1OB2|1|B|U|59
1OB2|1|B|C|60
1OB2|1|B|C|61
Current chains
- Chain B
- TRANSFER-RNA, PHE
Nearby chains
- Chain A
- ELONGATION FACTOR TU
Coloring options: