HL_1Q7Y_049

3D structure

PDB id

1Q7Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of CCdAP-Puromycin bound at the Peptidyl transferase center of the 50S ribosomal subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGUACAAG

Length

8 nucleotides

Bulged bases

1Q7Y|1|A|A|1919

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1Q7Y_049 not in the Motif Atlas

Homologous match to HL_4V9F_049

Geometric discrepancy: 0.0522

The information below is about HL_4V9F_049

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_92598.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

13

Unit IDs

1Q7Y|1|A|C|1916
1Q7Y|1|A|G|1917
1Q7Y|1|A|U|1918
1Q7Y|1|A|A|1919
1Q7Y|1|A|C|1920
1Q7Y|1|A|A|1921
1Q7Y|1|A|A|1922
1Q7Y|1|A|G|1923

Current chains

Chain A

23S ribosomal rna

Nearby chains

Chain 4

50S ribosomal protein L44E