HL_1Q82_014
3D structure
- PDB id
- 1Q82 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of CC-Puromycin bound to the A-site of the 50S ribosomal subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.98 Å
Loop
- Sequence
- GGCAUCGAC
- Length
- 9 nucleotides
- Bulged bases
- 1Q82|1|A|G|417
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1Q82_014 not in the Motif Atlas
- Homologous match to HL_4V9F_014
- Geometric discrepancy: 0.0522
- The information below is about HL_4V9F_014
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_52651.3
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 31
Unit IDs
1Q82|1|A|G|416
1Q82|1|A|G|417
1Q82|1|A|C|418
1Q82|1|A|A|419
1Q82|1|A|U|420
1Q82|1|A|C|421
1Q82|1|A|G|422
1Q82|1|A|A|423
1Q82|1|A|C|424
Current chains
- Chain A
- 23S ribosomal rna
Nearby chains
- Chain 4
- 50S ribosomal protein L44E
- Chain M
- 50S ribosomal protein L15P
- Chain N
- L15 Ribosomal Protein
Coloring options: