3D structure

PDB id
1QA6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX
Experimental method
X-RAY DIFFRACTION
Resolution
2.8 Å

Loop

Sequence
CGUAAUAG
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_18781.9
Basepair signature
cWW-tSH-R-R-R-R
Number of instances in this motif group
30

Unit IDs

1QA6|1|C|C|142
1QA6|1|C|G|143
1QA6|1|C|U|144
1QA6|1|C|A|145
1QA6|1|C|A|146
1QA6|1|C|U|147
1QA6|1|C|A|148
1QA6|1|C|G|149

Current chains

Chain C
58 NUCLEOTIDE RIBOSOMAL RNA DOMAIN

Nearby chains

No other chains within 10Å

Coloring options:

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