HL_1QA6_003

3D structure

PDB id

1QA6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

1QA6|1|D|A|120

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_03271.1

Basepair signature

cWW-R-R-R-tSH-R-R

Number of instances in this motif group

10

Unit IDs

1QA6|1|D|C|114
1QA6|1|D|U|115
1QA6|1|D|U|116
1QA6|1|D|A|117
1QA6|1|D|G|118
1QA6|1|D|A|119
1QA6|1|D|A|120
1QA6|1|D|G|121
1QA6|1|D|C|122
1QA6|1|D|A|123
1QA6|1|D|G|124

Current chains

Chain D

58 NUCLEOTIDE RIBOSOMAL RNA DOMAIN

Nearby chains

Chain B

RIBOSOMAL PROTEIN L11