HL_1QZW_004

3D structure

PDB id

1QZW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the complete core of archaeal SRP and implications for inter-domain communication

Experimental method

X-RAY DIFFRACTION

Resolution

4.1 Å

Loop

Sequence

CGGAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1QZW_004 not in the Motif Atlas

Geometric match to HL_6UFH_004

Geometric discrepancy: 0.3207

The information below is about HL_6UFH_004

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

1QZW|1|H|C|201
1QZW|1|H|G|202
1QZW|1|H|G|203
1QZW|1|H|A|204
1QZW|1|H|A|205
1QZW|1|H|G|206

Current chains

Chain H

7S RNA

Nearby chains