3D structure

PDB id
1S72 (explore in PDB, NAKB, or RNA 3D Hub)
Description
REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION
Experimental method
X-RAY DIFFRACTION
Resolution
2.4 Å

Loop

Sequence
UGAAAGG
Length
7 nucleotides
Bulged bases
1S72|1|0|A|874, 1S72|1|0|G|877
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_62228.7
Basepair signature
cWW-R-tSW-R
Number of instances in this motif group
7

Unit IDs

1S72|1|0|U|872
1S72|1|0|G|873
1S72|1|0|A|874
1S72|1|0|A|875
1S72|1|0|A|876
1S72|1|0|G|877
1S72|1|0|G|878

Current chains

Chain 0
23S ribosomal RNA

Nearby chains

Chain A
50S ribosomal protein L2P

Coloring options:

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