HL_1S72_058

3D structure

PDB id

1S72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

UGCAAGAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91226.7

Basepair signature

cWW-R-R-R-R-R

Number of instances in this motif group

23

Unit IDs

1S72|1|0|U|2358
1S72|1|0|G|2359
1S72|1|0|C|2360
1S72|1|0|A|2361
1S72|1|0|A|2362
1S72|1|0|G|2363
1S72|1|0|A|2364
1S72|1|0|G|2365

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain H

50S ribosomal protein L10e

Chain N

50S ribosomal protein L18P

Chain Q

50S ribosomal protein L21e