HL_1SI3_001

3D structure

PDB id

1SI3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the PAZ domain of human eIF2c1 in complex with a 9-mer siRNA-like duplex

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

CUCUCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1SI3|1|B|C|406
1SI3|1|B|U|407
1SI3|1|B|C|408
1SI3|1|B|U|409
1SI3|1|B|C|401||||4_675
1SI3|1|B|G|402||||4_675

Current chains

Chain B

5'-R(*CP*GP*UP*GP*AP*CP*UP*CP*U)-3'

Nearby chains

Chain A

Eukaryotic translation initiation factor 2C 1