HL_1VC5_001

3D structure

PDB id

1VC5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the Wild Type Hepatitis Delta Virus Gemonic Ribozyme Precursor, in EDTA solution

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CUCCUCUG

Length

8 nucleotides

Bulged bases

1VC5|1|B|U|123, 1VC5|1|B|U|127

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1VC5|1|B|C|119
1VC5|1|B|U|120
1VC5|1|B|C|121
1VC5|1|B|C|122
1VC5|1|B|U|123
1VC5|1|B|C|124
1VC5|1|B|U|127
1VC5|1|B|G|128

Current chains

Chain B

Hepatitis Delta virus ribozyme

Nearby chains