HL_1VVJ_067

3D structure

PDB id

1VVJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.44 Å

Loop

Sequence

GGAUGAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1VVJ_067 not in the Motif Atlas

Geometric match to HL_4L8H_001

Geometric discrepancy: 0.3759

The information below is about HL_4L8H_001

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

1VVJ|1|RA|G|1171
1VVJ|1|RA|G|1173
1VVJ|1|RA|A|1174
1VVJ|1|RA|U|1175
1VVJ|1|RA|G|1176
1VVJ|1|RA|A|1177
1VVJ|1|RA|C|1178

Current chains

Chain RA

23S rRNA

Nearby chains