HL_1VVJ_138
3D structure
- PDB id
- 1VVJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.44 Å
Loop
- Sequence
- GAUCAGCCAUGC
- Length
- 12 nucleotides
- Bulged bases
- 1VVJ|1|XA|U|1364
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1VVJ_138 not in the Motif Atlas
- Homologous match to HL_4LFB_030
- Geometric discrepancy: 0.0971
- The information below is about HL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
1VVJ|1|XA|G|1356
1VVJ|1|XA|A|1357
1VVJ|1|XA|U|1358
1VVJ|1|XA|C|1359
1VVJ|1|XA|A|1360
1VVJ|1|XA|G|1361
1VVJ|1|XA|C|1362
1VVJ|1|XA|C|1362|||A
1VVJ|1|XA|A|1363
1VVJ|1|XA|U|1364
1VVJ|1|XA|G|1365
1VVJ|1|XA|C|1366
Current chains
- Chain XA
- 16S rRNA
Nearby chains
- Chain XI
- 30S ribosomal protein S9
- Chain XJ
- 30S ribosomal protein S10
- Chain XM
- 30S ribosomal protein S13
- Chain XN
- 30S ribosomal protein S14
- Chain XU
- 30S ribosomal protein S21
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