HL_1VVJ_180
3D structure
- PDB id
- 1VVJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.44 Å
Loop
- Sequence
- GUUAAUAUUC
- Length
- 10 nucleotides
- Bulged bases
- 1VVJ|1|YA|U|1396, 1VVJ|1|YA|U|1397
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1VVJ_180 not in the Motif Atlas
- Homologous match to HL_7RQB_036
- Geometric discrepancy: 0.0999
- The information below is about HL_7RQB_036
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69023.2
- Basepair signature
- cWW-tWH-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
1VVJ|1|YA|G|1389
1VVJ|1|YA|U|1390
1VVJ|1|YA|U|1391
1VVJ|1|YA|A|1392
1VVJ|1|YA|A|1393
1VVJ|1|YA|U|1394
1VVJ|1|YA|A|1395
1VVJ|1|YA|U|1396
1VVJ|1|YA|U|1397
1VVJ|1|YA|C|1398
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain YX
- 50S ribosomal protein L23
Coloring options: