HL_1VW3_011

3D structure

PDB id

1VW3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UUUUGUAUAA

Length

10 nucleotides

Bulged bases

1VW3|1|A|A|473

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_72498.17

Basepair signature

cWW-tWH-R-R-R

Number of instances in this motif group

78

Unit IDs

1VW3|1|A|U|465
1VW3|1|A|U|466
1VW3|1|A|U|467
1VW3|1|A|U|468
1VW3|1|A|G|469
1VW3|1|A|U|470
1VW3|1|A|A|471
1VW3|1|A|U|472
1VW3|1|A|A|473
1VW3|1|A|A|474

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain C

54S ribosomal protein L9, mitochondrial