HL_1VW3_015

3D structure

PDB id

1VW3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGUUGCAAUA

Length

10 nucleotides

Bulged bases

1VW3|1|A|U|638, 1VW3|1|A|A|642, 1VW3|1|A|U|643

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_88311.7

Basepair signature

cWW-R-tSW-R-R

Number of instances in this motif group

8

Unit IDs

1VW3|1|A|U|635
1VW3|1|A|G|636
1VW3|1|A|U|637
1VW3|1|A|U|638
1VW3|1|A|G|639
1VW3|1|A|C|640
1VW3|1|A|A|641
1VW3|1|A|A|642
1VW3|1|A|U|643
1VW3|1|A|A|644

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain C

54S ribosomal protein L9, mitochondrial