HL_1VW3_037

3D structure

PDB id

1VW3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUGAAGAUGC

Length

10 nucleotides

Bulged bases

1VW3|1|A|A|1930, 1VW3|1|A|A|1931, 1VW3|1|A|G|1932

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_18156.7

Basepair signature

cWW-R-R-tWH-R

Number of instances in this motif group

10

Unit IDs

1VW3|1|A|G|1927
1VW3|1|A|U|1928
1VW3|1|A|G|1929
1VW3|1|A|A|1930
1VW3|1|A|A|1931
1VW3|1|A|G|1932
1VW3|1|A|A|1933
1VW3|1|A|U|1934
1VW3|1|A|G|1935
1VW3|1|A|C|1936

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain C

54S ribosomal protein L9, mitochondrial