HL_1VW3_041

3D structure

PDB id

1VW3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AGCAAAAGUAUCU

Length

13 nucleotides

Bulged bases

1VW3|1|A|A|2294, 1VW3|1|A|C|2301

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_41833.7

Basepair signature

cWW-tSH-tHH-tWW-R-R-R

Number of instances in this motif group

10

Unit IDs

1VW3|1|A|A|2290
1VW3|1|A|G|2291
1VW3|1|A|C|2292
1VW3|1|A|A|2293
1VW3|1|A|A|2294
1VW3|1|A|A|2295
1VW3|1|A|A|2296
1VW3|1|A|G|2297
1VW3|1|A|U|2298
1VW3|1|A|A|2299
1VW3|1|A|U|2300
1VW3|1|A|C|2301
1VW3|1|A|U|2302

Current chains

Chain A

21S ribosomal RNA

Nearby chains