3D structure

PDB id
1VW3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the yeast mitochondrial large ribosomal subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
UCG
Length
3 nucleotides
Bulged bases
None detected
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_1VW3_046 not in the Motif Atlas
Geometric match to HL_4V9F_003
Geometric discrepancy: 0.3856
The information below is about HL_4V9F_003
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_75660.5
Basepair signature
cWW-F
Number of instances in this motif group
19

Unit IDs

1VW3|1|A|U|2477
1VW3|1|A|C|2478
1VW3|1|A|G|2573

Current chains

Chain A
21S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:


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