HL_1VX3_038

3D structure

PDB id

1VX3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2. This entry contains the large subunit ribosomal RNA.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GAGUUCUCUUUUC

Length

13 nucleotides

Bulged bases

1VX3|1|5|U|2631

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1VX3|1|5|G|2622
1VX3|1|5|A|2623
1VX3|1|5|G|2624
1VX3|1|5|U|2625
1VX3|1|5|U|2626
1VX3|1|5|C|2627
1VX3|1|5|U|2628
1VX3|1|5|C|2629
1VX3|1|5|U|2630
1VX3|1|5|U|2631
1VX3|1|5|U|2632
1VX3|1|5|U|2633
1VX3|1|5|C|2634

Current chains

Chain 5

28S ribosomal RNA

Nearby chains