HL_1VX3_069

3D structure

PDB id

1VX3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2. This entry contains the large subunit ribosomal RNA.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UUCGUAGACGACCUG

Length

15 nucleotides

Bulged bases

1VX3|1|5|U|4976

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1VX3|1|5|U|4972
1VX3|1|5|U|4973
1VX3|1|5|C|4974
1VX3|1|5|G|4975
1VX3|1|5|U|4976
1VX3|1|5|A|4977
1VX3|1|5|G|4978
1VX3|1|5|A|4979
1VX3|1|5|C|4980
1VX3|1|5|G|4981
1VX3|1|5|A|4982
1VX3|1|5|C|4983
1VX3|1|5|C|4984
1VX3|1|5|U|4985
1VX3|1|5|G|4986

Current chains

Chain 5

28S ribosomal RNA

Nearby chains