HL_1VY9_001

3D structure

PDB id

1VY9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli CRISPR RNA-guided surveillance complex, Cascade

Experimental method

X-RAY DIFFRACTION

Resolution

3.24 Å

Loop

Sequence

CGCCAG

Length

6 nucleotides

Bulged bases

1VY9|1|L|C|53, 1VY9|1|L|C|54

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51271.1

Basepair signature

cWW-R

Number of instances in this motif group

2

Unit IDs

1VY9|1|L|C|51
1VY9|1|L|G|52
1VY9|1|L|C|53
1VY9|1|L|C|54
1VY9|1|L|A|55
1VY9|1|L|G|56

Current chains

Chain L

Escherichia coli strain ECOR44 cluster 1 CRISPR region

Nearby chains

Chain A

CRISPR system Cascade subunit CasE