HL_1XNQ_019

3D structure

PDB id

1XNQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Inosine-Adenine Wobble Base Pair Complex in the Context of the Decoding Center

Experimental method

X-RAY DIFFRACTION

Resolution

3.05 Å

Loop

Sequence

CUAACG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1XNQ_019 not in the Motif Atlas

Homologous match to HL_4LFB_019

Geometric discrepancy: 0.0801

The information below is about HL_4LFB_019

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

1XNQ|1|A|C|862
1XNQ|1|A|U|863
1XNQ|1|A|A|864
1XNQ|1|A|A|865
1XNQ|1|A|C|866
1XNQ|1|A|G|867

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain E

Ribosomal protein S5