3D structure

PDB id
1XNQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of an Inosine-Adenine Wobble Base Pair Complex in the Context of the Decoding Center
Experimental method
X-RAY DIFFRACTION
Resolution
3.05 Å

Loop

Sequence
CUACGG
Length
6 nucleotides
Bulged bases
1XNQ|1|A|A|1451
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_1XNQ_031 not in the Motif Atlas
Homologous match to HL_4LFB_031
Geometric discrepancy: 0.089
The information below is about HL_4LFB_031
Detailed Annotation
UNCG
Broad Annotation
No text annotation
Motif group
HL_34617.5
Basepair signature
cWW-tSW-F
Number of instances in this motif group
57

Unit IDs

1XNQ|1|A|C|1449
1XNQ|1|A|U|1450
1XNQ|1|A|A|1451
1XNQ|1|A|C|1452
1XNQ|1|A|G|1453
1XNQ|1|A|G|1454

Current chains

Chain A
16S ribosomal RNA

Nearby chains

Chain T
Ribosomal protein S20

Coloring options:


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