3D structure

PDB id
1Y0Q (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of an active group I ribozyme-product complex
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
GGAAAC
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_54105.2
Basepair signature
cWW-tSH-R-R
Number of instances in this motif group
298

Unit IDs

1Y0Q|1|A|G|204
1Y0Q|1|A|G|205
1Y0Q|1|A|A|206
1Y0Q|1|A|A|207
1Y0Q|1|A|A|208
1Y0Q|1|A|C|209

Current chains

Chain A
Group I ribozyme

Nearby chains

No other chains within 10Å

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1201 s