HL_1Y69_070

3D structure

PDB id

1Y69 (explore in PDB, NAKB, or RNA 3D Hub)

Description

RRF domain I in complex with the 50S ribosomal subunit from Deinococcus radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

3.33 Å

Loop

Sequence

GGAACUGAAACAUCUCAGUAC

Length

21 nucleotides

Bulged bases

1Y69|1|0|A|173, 1Y69|1|0|A|176

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1Y69|1|0|G|165
1Y69|1|0|G|166
1Y69|1|0|A|167
1Y69|1|0|A|168
1Y69|1|0|C|169
1Y69|1|0|U|170
1Y69|1|0|G|171
1Y69|1|0|A|172
1Y69|1|0|A|173
1Y69|1|0|A|174
1Y69|1|0|C|175
1Y69|1|0|A|176
1Y69|1|0|U|177
1Y69|1|0|C|178
1Y69|1|0|U|179
1Y69|1|0|C|180
1Y69|1|0|A|181
1Y69|1|0|G|182
1Y69|1|0|U|183
1Y69|1|0|A|184
1Y69|1|0|C|185

Current chains

Chain 0

23S ribosomal RNA

Nearby chains