HL_1Y69_071

3D structure

PDB id

1Y69 (explore in PDB, NAKB, or RNA 3D Hub)

Description

RRF domain I in complex with the 50S ribosomal subunit from Deinococcus radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

3.33 Å

Loop

Sequence

GUUAGUAGCGGCGAGCGAACCC

Length

22 nucleotides

Bulged bases

1Y69|1|0|G|219, 1Y69|1|0|C|226

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1Y69|1|0|G|215
1Y69|1|0|U|216
1Y69|1|0|U|217
1Y69|1|0|A|218
1Y69|1|0|G|219
1Y69|1|0|U|220
1Y69|1|0|A|221
1Y69|1|0|G|222
1Y69|1|0|C|223
1Y69|1|0|G|224
1Y69|1|0|G|225
1Y69|1|0|C|226
1Y69|1|0|G|227
1Y69|1|0|A|228
1Y69|1|0|G|229
1Y69|1|0|C|230
1Y69|1|0|G|231
1Y69|1|0|A|232
1Y69|1|0|A|233
1Y69|1|0|C|234
1Y69|1|0|C|235
1Y69|1|0|C|236

Current chains

Chain 0

23S ribosomal RNA

Nearby chains