HL_1Y69_074

3D structure

PDB id

1Y69 (explore in PDB, NAKB, or RNA 3D Hub)

Description

RRF domain I in complex with the 50S ribosomal subunit from Deinococcus radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

3.33 Å

Loop

Sequence

GGUCAGAAAAUCUAC

Length

15 nucleotides

Bulged bases

1Y69|1|0|U|1505, 1Y69|1|0|A|1509, 1Y69|1|0|U|1513

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1Y69|1|0|G|1503
1Y69|1|0|G|1504
1Y69|1|0|U|1505
1Y69|1|0|C|1506
1Y69|1|0|A|1507
1Y69|1|0|G|1508
1Y69|1|0|A|1509
1Y69|1|0|A|1510
1Y69|1|0|A|1511
1Y69|1|0|A|1512
1Y69|1|0|U|1513
1Y69|1|0|C|1514
1Y69|1|0|U|1515
1Y69|1|0|A|1516
1Y69|1|0|C|1517

Current chains

Chain 0

23S ribosomal RNA

Nearby chains