HL_1ZJW_002

3D structure

PDB id

1ZJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glutaminyl-tRNA synthetase complexed to glutamine and 2'deoxy A76 glutamine tRNA

Experimental method

X-RAY DIFFRACTION

Resolution

2.5 Å

Loop

Sequence

AUUCUGAUU

Length

9 nucleotides

Bulged bases

1ZJW|1|B|C|934, 1ZJW|1|B|G|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1ZJW_002 not in the Motif Atlas

Geometric match to HL_1QTQ_002

Geometric discrepancy: 0.1143

The information below is about HL_1QTQ_002

Detailed Annotation

tRNA anticodon loop with synthetase

Broad Annotation

T-loop

Motif group

HL_63894.1

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

18

Unit IDs

1ZJW|1|B|A|931
1ZJW|1|B|U|932
1ZJW|1|B|U|933
1ZJW|1|B|C|934
1ZJW|1|B|U|935
1ZJW|1|B|G|936
1ZJW|1|B|A|937
1ZJW|1|B|U|938
1ZJW|1|B|U|939

Current chains

Chain B

Glutaminyl-tRNA

Nearby chains

Chain A

Glutaminyl-tRNA synthetase