HL_1ZJW_003

3D structure

PDB id

1ZJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glutaminyl-tRNA synthetase complexed to glutamine and 2'deoxy A76 glutamine tRNA

Experimental method

X-RAY DIFFRACTION

Resolution

2.5 Å

Loop

Sequence

GUUCGAAUC

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1ZJW_003 not in the Motif Atlas

Geometric match to HL_6UFM_003

Geometric discrepancy: 0.1216

The information below is about HL_6UFM_003

Detailed Annotation

T-loop with 2 stacked bulged bases

Broad Annotation

T-loop

Motif group

HL_28252.9

Basepair signature

cWW-tWH-F-F-F-F-F

Number of instances in this motif group

141

Unit IDs

1ZJW|1|B|G|953
1ZJW|1|B|U|954
1ZJW|1|B|U|955
1ZJW|1|B|C|956
1ZJW|1|B|G|957
1ZJW|1|B|A|958
1ZJW|1|B|A|959
1ZJW|1|B|U|960
1ZJW|1|B|C|961

Current chains

Chain B

Glutaminyl-tRNA

Nearby chains