HL_22AV_001

3D structure

PDB id

22AV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of NSUN2-tRNATyr-SAM

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

GUUCGAAUC

Length

9 nucleotides

Bulged bases

22AV|1|B|A|61, 22AV|1|B|U|62

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_22AV_001 not in the Motif Atlas

Homologous match to HL_6GSL_222

Geometric discrepancy: 0.4274

The information below is about HL_6GSL_222

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

22AV|1|B|G|55
22AV|1|B|U|56
22AV|1|B|U|57
22AV|1|B|C|58
22AV|1|B|G|59
22AV|1|B|A|60
22AV|1|B|A|61
22AV|1|B|U|62
22AV|1|B|C|63

Current chains

Chain B

tRNAtyr (78-MER)

Nearby chains

Chain A

NSUN2