HL_22TU_002
3D structure
- PDB id
- 22TU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome in complex with DHX29
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUUAGGGUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_22TU_002 not in the Motif Atlas
- Homologous match to HL_9MTS_102
- Geometric discrepancy: 0.1064
- The information below is about HL_9MTS_102
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 44
Unit IDs
22TU|1|B4|C|30
22TU|1|B4|U|31
22TU|1|B4|U|32
22TU|1|B4|A|33
22TU|1|B4|G|34
22TU|1|B4|G|35
22TU|1|B4|G|36
22TU|1|B4|U|37
22TU|1|B4|G|38
Current chains
- Chain B4
- tRNA
Nearby chains
- Chain C4
- Transfer RNA; tRNA
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
- Chain SP
- 40S ribosomal protein S15
- Chain SQ
- 40S ribosomal protein S16
Coloring options: