HL_22TU_005
3D structure
- PDB id
- 22TU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome in complex with DHX29
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUUAGGGUGCG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_22TU_005 not in the Motif Atlas
- Homologous match to HL_2BTE_006
- Geometric discrepancy: 0.2973
- The information below is about HL_2BTE_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
22TU|1|C4|C|30
22TU|1|C4|U|31
22TU|1|C4|U|32
22TU|1|C4|A|33
22TU|1|C4|G|34
22TU|1|C4|G|35
22TU|1|C4|G|36
22TU|1|C4|U|37
22TU|1|C4|G|38
22TU|1|C4|C|39
22TU|1|C4|G|40
Current chains
- Chain C4
- tRNA
Nearby chains
- Chain B4
- Transfer RNA; tRNA
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
- Chain SF
- 40S ribosomal protein S5
- Chain SO
- 40S ribosomal protein S14
- Chain Sc
- 40S ribosomal protein S28
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