HL_22TU_058
3D structure
- PDB id
- 22TU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome in complex with DHX29
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UCAAACGGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 22TU|1|L5|A|4214, 22TU|1|L5|C|4221
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_22TU_058 not in the Motif Atlas
- Homologous match to HL_8GLP_060
- Geometric discrepancy: 0.0555
- The information below is about HL_8GLP_060
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02042.4
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
22TU|1|L5|U|4210
22TU|1|L5|C|4211
22TU|1|L5|A|4212
22TU|1|L5|A|4213
22TU|1|L5|A|4214
22TU|1|L5|C|4215
22TU|1|L5|G|4216
22TU|1|L5|G|4217
22TU|1|L5|U|4218
22TU|1|L5|A|4219
22TU|1|L5|A|4220
22TU|1|L5|C|4221
22TU|1|L5|G|4222
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LI
- Large ribosomal subunit protein uL16
- Chain LT
- 60S ribosomal protein L21
- Chain Lb
- 60S ribosomal protein L29
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