HL_22TU_060

3D structure

PDB id

22TU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome in complex with DHX29

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CAGAAGGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

22TU|1|L5|C|4270
22TU|1|L5|A|4271
22TU|1|L5|G|4272
22TU|1|L5|A|4273
22TU|1|L5|A|4274
22TU|1|L5|G|4275
22TU|1|L5|G|4276
22TU|1|L5|G|4277

Current chains

Chain L5

28S rRNA

Nearby chains

Chain B4

Transfer RNA; tRNA

Chain LI

Large ribosomal subunit protein uL16

Chain LT

60S ribosomal protein L21

Chain Lo

60S ribosomal protein L36a