HL_22TU_106
3D structure
- PDB id
- 22TU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome in complex with DHX29
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AGCGAU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_22TU_106 not in the Motif Atlas
- Homologous match to HL_9H3G_101
- Geometric discrepancy: 0.0823
- The information below is about HL_9H3G_101
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.7
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 456
Unit IDs
22TU|1|S2|A|1353
22TU|1|S2|G|1354
22TU|1|S2|C|1355
22TU|1|S2|G|1356
22TU|1|S2|A|1357
22TU|1|S2|U|1358
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SA
- Small ribosomal subunit protein uS2
- Chain SC
- 40S ribosomal protein S2
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