HL_28UH_005
3D structure
- PDB id
- 28UH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome, trapped conformational ground state of SSU-h44 apical loop, with A/P- and P/E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.06 Å
Loop
- Sequence
- GGUAACGGC
- Length
- 9 nucleotides
- Bulged bases
- 28UH|1|A|G|266
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_28UH_005 not in the Motif Atlas
- Homologous match to HL_6CZR_077
- Geometric discrepancy: 0.2783
- The information below is about HL_6CZR_077
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_84299.3
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
28UH|1|A|G|259
28UH|1|A|G|260
28UH|1|A|U|261
28UH|1|A|A|262
28UH|1|A|A|263
28UH|1|A|C|264
28UH|1|A|G|265
28UH|1|A|G|266
28UH|1|A|C|267
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain Q
- Small ribosomal subunit protein uS17
- Chain T
- Small ribosomal subunit protein bS20
Coloring options: