HL_28UI_065
3D structure
- PDB id
- 28UI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome, trapped conformational excited state of SSU-h44 apical loop, with A- and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.1 Å
Loop
- Sequence
- GUUAAUAUUC
- Length
- 10 nucleotides
- Bulged bases
- 28UI|1|a|U|1396, 28UI|1|a|U|1397
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_28UI_065 not in the Motif Atlas
- Homologous match to HL_7A0S_035
- Geometric discrepancy: 0.3544
- The information below is about HL_7A0S_035
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_77449.3
- Basepair signature
- cWW-tWH-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
28UI|1|a|G|1389
28UI|1|a|U|1390
28UI|1|a|U|1391
28UI|1|a|A|1392
28UI|1|a|A|1393
28UI|1|a|U|1394
28UI|1|a|A|1395
28UI|1|a|U|1396
28UI|1|a|U|1397
28UI|1|a|C|1398
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain s
- Large ribosomal subunit protein uL23
Coloring options: