HL_28UK_021

3D structure

PDB id

28UK (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome, conformational ground state mutation in SSU-h41, with A- and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.24 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

28UK|1|A|U|1030

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_28UK_021 not in the Motif Atlas

Geometric match to HL_1I6U_001

Geometric discrepancy: 0.2317

The information below is about HL_1I6U_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.6

Basepair signature

cWW-tSW-F

Number of instances in this motif group

67

Unit IDs

28UK|1|A|C|1028
28UK|1|A|U|1029
28UK|1|A|U|1030
28UK|1|A|C|1031
28UK|1|A|G|1032
28UK|1|A|G|1033

Current chains

Chain A

16S rRNA

Nearby chains