HL_28UM_097
3D structure
- PDB id
- 28UM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome, conformational excited state mutation in SSU-h41, with A- and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- GAAGACGAC
- Length
- 9 nucleotides
- Bulged bases
- 28UM|1|a|A|2820
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_28UM_097 not in the Motif Atlas
- Homologous match to HL_7A0S_067
- Geometric discrepancy: 0.1793
- The information below is about HL_7A0S_067
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_37889.3
- Basepair signature
- cWW-cSW-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
28UM|1|a|G|2819
28UM|1|a|A|2820
28UM|1|a|A|2821
28UM|1|a|G|2822
28UM|1|a|A|2823
28UM|1|a|C|2824
28UM|1|a|G|2825
28UM|1|a|A|2826
28UM|1|a|C|2827
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain d
- Large ribosomal subunit protein uL3
- Chain m
- Large ribosomal subunit protein bL17
Coloring options: