HL_28ZU_002
3D structure
- PDB id
- 28ZU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 48S PIC with Kozak mRNA and eIF1A W70A mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GCCCAU(T6A)AC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: T6A
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_28ZU_002 not in the Motif Atlas
- Homologous match to HL_4TUE_142
- Geometric discrepancy: 0.1213
- The information below is about HL_4TUE_142
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81376.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 44
Unit IDs
28ZU|1|G|G|31
28ZU|1|G|C|32
28ZU|1|G|C|33
28ZU|1|G|C|34
28ZU|1|G|A|35
28ZU|1|G|U|36
28ZU|1|G|T6A|37
28ZU|1|G|A|38
28ZU|1|G|C|39
Current chains
- Chain G
- initiator tRNA
Nearby chains
- Chain B
- mRNA
- Chain D
- Eukaryotic translation initiation factor 2 subunit 1
- Chain H
- Eukaryotic translation initiation factor 1A, X-chromosomal
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
- Chain SP
- 40S ribosomal protein S15
- Chain SQ
- 40S ribosomal protein S16
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