HL_28ZU_026

3D structure

PDB id

28ZU (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 48S PIC with Kozak mRNA and eIF1A W70A mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGCAAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_28ZU_026 not in the Motif Atlas

Homologous match to HL_9H3G_098

Geometric discrepancy: 0.1017

The information below is about HL_9H3G_098

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34789.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

456

Unit IDs

28ZU|1|S2|U|1178
28ZU|1|S2|G|1179
28ZU|1|S2|C|1180
28ZU|1|S2|A|1181
28ZU|1|S2|A|1182
28ZU|1|S2|A|1183

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain Ln

60S ribosomal protein L41