HL_28ZU_036

3D structure

PDB id

28ZU (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 48S PIC with Kozak mRNA and eIF1A W70A mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGGGUCGGCCCACGGCC

Length

17 nucleotides

Bulged bases

28ZU|1|S2|G|1760, 28ZU|1|S2|C|1762, 28ZU|1|S2|G|1763, 28ZU|1|S2|G|1764, 28ZU|1|S2|C|1765, 28ZU|1|S2|C|1766, 28ZU|1|S2|C|1767, 28ZU|1|S2|A|1768, 28ZU|1|S2|C|1769, 28ZU|1|S2|G|1770, 28ZU|1|S2|G|1771, 28ZU|1|S2|C|1772

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28ZU|1|S2|G|1757
28ZU|1|S2|G|1758
28ZU|1|S2|G|1759
28ZU|1|S2|G|1760
28ZU|1|S2|U|1761
28ZU|1|S2|C|1762
28ZU|1|S2|G|1763
28ZU|1|S2|G|1764
28ZU|1|S2|C|1765
28ZU|1|S2|C|1766
28ZU|1|S2|C|1767
28ZU|1|S2|A|1768
28ZU|1|S2|C|1769
28ZU|1|S2|G|1770
28ZU|1|S2|G|1771
28ZU|1|S2|C|1772
28ZU|1|S2|C|1773

Current chains

Chain S2

18S ribosomal RNA

Nearby chains