HL_28ZY_028

3D structure

PDB id

28ZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 48S PIC with mRNA (Kozak_2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAUUGAUAGCUC

Length

12 nucleotides

Bulged bases

28ZY|1|S2|U|1300

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28ZY|1|S2|G|1294
28ZY|1|S2|A|1295
28ZY|1|S2|U|1296
28ZY|1|S2|U|1297
28ZY|1|S2|G|1298
28ZY|1|S2|A|1299
28ZY|1|S2|U|1300
28ZY|1|S2|A|1301
28ZY|1|S2|G|1302
28ZY|1|S2|C|1303
28ZY|1|S2|U|1304
28ZY|1|S2|C|1305

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SP

40S ribosomal protein S15

Chain Sd

40S ribosomal protein S29

Chain Sf

Ubiquitin